Sedolisin

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S8/S53 domain
File:PDB 1ga6 EBI.jpg
Structure of pseudomonalisin (PDB: 1GA6​)
Identifiers
SymbolPeptidase_S8
PfamPF00082
InterProIPR000209
PROSITEPDOC00125
CATH1GA6
SCOP21GA6 / SCOPe / SUPFAM
CDDcd07477
Available protein structures:
Pfam  structures / ECOD  
PDBRCSB PDB; PDBe; PDBj
PDBsumstructure summary

The sedolisin (MEROPS S53) family of peptidases are a family of serine proteases structurally related to the subtilisin (S8) family. Well-known members of this family include sedolisin ("pseudomonalisin") found in Pseudomonas bacteria, xanthomonalisin ("sedolisin-B"), physarolisin as well as animal tripeptidyl peptidase I. It is also known as sedolysin or serine-carboxyl peptidase. This group of enzymes contains a variation on the catalytic triad: unlike S8 which uses Ser-His-Asp, this group runs on Ser-Glu-Asp, with an additional acidic residue Asp in the oxyanion hole.[1]

Their optimal pH is around 3. Most members of the family are produced as a precursor protein with N-terminal (InterProIPR015366) and sometimes C-terminal peptides that need to be cleaved off.[2]

Family members

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Sedolisin

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Sedolisin
Identifiers
EC no.3.4.21.100
CAS no.848318-58-1
Databases
IntEnzIntEnz view
BRENDABRENDA entry
ExPASyNiceZyme view
KEGGKEGG entry
MetaCycmetabolic pathway
PRIAMprofile
PDB structuresRCSB PDB PDBe PDBsum
Search
PMCarticles
PubMedarticles
NCBIproteins

Sedolisin (P42790, pseudomonapepsin, sedolysin) is a serine protease. It is secreted by Pseudomonas sp. 101. It performs hydrolysis of the B chain of insulin at -Glu13-Ala-, -Leu15-Tyr- and -Phe25-Tyr-, and angiotensin I at -Tyr4-Ile-. A good synthetic substrate is Lys-Pro-Ile-Glu-Phe-Phe(NO2)-Arg-Leu.[3][4][5][6]

Xanthomonalisin

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Xanthomonalisin
Identifiers
EC no.3.4.21.101
CAS no.113356-29-9
Databases
IntEnzIntEnz view
BRENDABRENDA entry
ExPASyNiceZyme view
KEGGKEGG entry
MetaCycmetabolic pathway
PRIAMprofile
PDB structuresRCSB PDB PDBe PDBsum
Search
PMCarticles
PubMedarticles
NCBIproteins

Xanthomonalisin (Q60106) is found in Xanthomonas bacteria. It cleaves caesin and clots milk.[7][8]

Physarolisin

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Physarolisin
Identifiers
EC no.3.4.21.103
CAS no.94949-28-7
Databases
IntEnzIntEnz view
BRENDABRENDA entry
ExPASyNiceZyme view
KEGGKEGG entry
MetaCycmetabolic pathway
PRIAMprofile
PDB structuresRCSB PDB PDBe PDBsum
Search
PMCarticles
PubMedarticles
NCBIproteins

Physarolisin (Q8MZS4, physaropepsin) is a milk-clotting enzyme. It shows preferential cleavage of Gly8-Ser in B chain of insulin most rapidly, followed by Leu11!Val, Cys(SO3H)19-Gly and Phe24-Phe.[9][10][11][12][13]

It is special in that it is cold-adapted. It was discovered in the slime mold Physarum flavicomum. Similar proteins (InterProIPR017001) are also found in archaea.[14]

References

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